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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1383560 |
| Transcript ID | Lj3g3v1383560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 40 member 2-like [Cicer arietinum] gi|502147555|ref|XP_004506829.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 95 | 95 | – | – | |
| SUPERFAMILY | 39 | 239 | 201 | 3.14E-11 | ||
| PANTHER | 44 | 463 | 420 | 3.90E-162 | – | |
| PANTHER | 44 | 463 | 420 | 3.90E-162 | – | |
| Pfam | 57 | 377 | 321 | 1.60E-98 | ||
| Phobius | 96 | 120 | 25 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 121 | 125 | 5 | – | – | |
| Phobius | 126 | 149 | 24 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 150 | 186 | 37 | – | – | |
| TMHMM | 183 | 202 | 20 | – | – | |
| Phobius | 187 | 212 | 26 | – | – | |
| Phobius | 213 | 217 | 5 | – | – | |
| TMHMM | 217 | 239 | 23 | – | – | |
| Phobius | 218 | 239 | 22 | – | – | |
| Phobius | 240 | 301 | 62 | – | – | |
| SUPERFAMILY | 284 | 438 | 155 | 3.14E-11 | ||
| Phobius | 302 | 326 | 25 | – | – | |
| TMHMM | 303 | 325 | 23 | – | – | |
| Phobius | 327 | 331 | 5 | – | – | |
| Phobius | 332 | 358 | 27 | – | – | |
| TMHMM | 335 | 357 | 23 | – | – | |
| Phobius | 359 | 383 | 25 | – | – | |
| Phobius | 384 | 408 | 25 | – | – | |
| Phobius | 409 | 413 | 5 | – | – | |
| Phobius | 414 | 434 | 21 | – | – | |
| TMHMM | 417 | 439 | 23 | – | – | |
| Phobius | 435 | 490 | 56 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v1383560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1383560.1, powered by CORGI.
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