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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1393700 |
| Transcript ID | Lj3g3v1393700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 40 member 1-like [Glycine max] gi|356506502|ref|XP_003522020.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 14 | 505 | 492 | 9.70E-226 | – | |
| PANTHER | 14 | 505 | 492 | 9.70E-226 | – | |
| Phobius | 21 | 39 | 19 | – | – | |
| TMHMM | 21 | 40 | 20 | – | – | |
| Pfam | 24 | 467 | 444 | 2.30E-147 | ||
| SUPERFAMILY | 25 | 237 | 213 | 4.27E-15 | ||
| Phobius | 40 | 58 | 19 | – | – | |
| Phobius | 59 | 82 | 24 | – | – | |
| TMHMM | 60 | 82 | 23 | – | – | |
| Phobius | 83 | 93 | 11 | – | – | |
| Phobius | 94 | 115 | 22 | – | – | |
| TMHMM | 94 | 116 | 23 | – | – | |
| Phobius | 116 | 126 | 11 | – | – | |
| TMHMM | 126 | 148 | 23 | – | – | |
| Phobius | 127 | 152 | 26 | – | – | |
| Phobius | 153 | 184 | 32 | – | – | |
| Phobius | 185 | 210 | 26 | – | – | |
| TMHMM | 185 | 207 | 23 | – | – | |
| Phobius | 211 | 215 | 5 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| Phobius | 216 | 233 | 18 | – | – | |
| Phobius | 234 | 299 | 66 | – | – | |
| SUPERFAMILY | 282 | 484 | 203 | 4.27E-15 | ||
| Phobius | 300 | 318 | 19 | – | – | |
| TMHMM | 301 | 320 | 20 | – | – | |
| Phobius | 319 | 329 | 11 | – | – | |
| Phobius | 330 | 353 | 24 | – | – | |
| TMHMM | 330 | 352 | 23 | – | – | |
| Phobius | 354 | 364 | 11 | – | – | |
| TMHMM | 365 | 384 | 20 | – | – | |
| Phobius | 365 | 384 | 20 | – | – | |
| Phobius | 385 | 389 | 5 | – | – | |
| TMHMM | 388 | 406 | 19 | – | – | |
| Phobius | 390 | 413 | 24 | – | – | |
| Phobius | 414 | 424 | 11 | – | – | |
| Phobius | 425 | 450 | 26 | – | – | |
| Phobius | 451 | 455 | 5 | – | – | |
| Phobius | 456 | 476 | 21 | – | – | |
| TMHMM | 459 | 481 | 23 | – | – | |
| Phobius | 477 | 523 | 47 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v1393700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1393700.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.