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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1393730 |
| Transcript ID | Lj3g3v1393730.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 40 member 1-like [Glycine max] gi|356506502|ref|XP_003522020.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 53 | 53 | – | – | |
| PANTHER | 10 | 503 | 494 | 3.70E-228 | – | |
| PANTHER | 10 | 503 | 494 | 3.70E-228 | – | |
| SUPERFAMILY | 19 | 233 | 215 | 1.13E-17 | ||
| Pfam | 20 | 465 | 446 | 1.70E-152 | ||
| Phobius | 54 | 78 | 25 | – | – | |
| TMHMM | 56 | 78 | 23 | – | – | |
| Phobius | 79 | 89 | 11 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 90 | 114 | 25 | – | – | |
| Phobius | 115 | 119 | 5 | – | – | |
| Phobius | 120 | 143 | 24 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 144 | 180 | 37 | – | – | |
| TMHMM | 177 | 196 | 20 | – | – | |
| Phobius | 181 | 206 | 26 | – | – | |
| Phobius | 207 | 211 | 5 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 212 | 233 | 22 | – | – | |
| Phobius | 234 | 295 | 62 | – | – | |
| SUPERFAMILY | 278 | 478 | 201 | 1.13E-17 | ||
| Gene3D | 294 | 475 | 182 | 2.60E-09 | – | |
| Phobius | 296 | 314 | 19 | – | – | |
| TMHMM | 296 | 315 | 20 | – | – | |
| Phobius | 315 | 325 | 11 | – | – | |
| Phobius | 326 | 351 | 26 | – | – | |
| TMHMM | 330 | 352 | 23 | – | – | |
| Phobius | 352 | 362 | 11 | – | – | |
| Phobius | 363 | 382 | 20 | – | – | |
| Phobius | 383 | 387 | 5 | – | – | |
| Phobius | 388 | 411 | 24 | – | – | |
| Phobius | 412 | 422 | 11 | – | – | |
| Phobius | 423 | 448 | 26 | – | – | |
| Phobius | 449 | 453 | 5 | – | – | |
| Phobius | 454 | 474 | 21 | – | – | |
| TMHMM | 457 | 479 | 23 | – | – | |
| Phobius | 475 | 523 | 49 | – | – | |
| MobiDBLite | 500 | 523 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v1393730.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1393730.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.