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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1393730 |
| Transcript ID | Lj3g3v1393730.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 40 member 2-like [Cicer arietinum] gi|502147555|ref|XP_004506829.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 467 | 467 | 1.30E-213 | – | |
| PANTHER | 1 | 467 | 467 | 1.30E-213 | – | |
| Pfam | 1 | 429 | 429 | 3.40E-144 | ||
| SUPERFAMILY | 6 | 197 | 192 | 2.62E-15 | ||
| Phobius | 20 | 42 | 23 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 43 | 53 | 11 | – | – | |
| Phobius | 54 | 78 | 25 | – | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 79 | 83 | 5 | – | – | |
| Phobius | 84 | 107 | 24 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 108 | 144 | 37 | – | – | |
| TMHMM | 141 | 160 | 20 | – | – | |
| Phobius | 145 | 170 | 26 | – | – | |
| Phobius | 171 | 175 | 5 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 176 | 197 | 22 | – | – | |
| Phobius | 198 | 259 | 62 | – | – | |
| SUPERFAMILY | 242 | 442 | 201 | 2.62E-15 | ||
| Gene3D | 258 | 439 | 182 | 2.60E-09 | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| TMHMM | 260 | 279 | 20 | – | – | |
| Phobius | 279 | 289 | 11 | – | – | |
| Phobius | 290 | 315 | 26 | – | – | |
| TMHMM | 294 | 316 | 23 | – | – | |
| Phobius | 316 | 326 | 11 | – | – | |
| Phobius | 327 | 346 | 20 | – | – | |
| Phobius | 347 | 351 | 5 | – | – | |
| Phobius | 352 | 375 | 24 | – | – | |
| Phobius | 376 | 386 | 11 | – | – | |
| Phobius | 387 | 412 | 26 | – | – | |
| Phobius | 413 | 417 | 5 | – | – | |
| Phobius | 418 | 438 | 21 | – | – | |
| TMHMM | 421 | 443 | 23 | – | – | |
| Phobius | 439 | 487 | 49 | – | – | |
| MobiDBLite | 464 | 487 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v1393730.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1393730.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.