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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1473560 |
| Transcript ID | Lj3g3v1473560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ABC1 family protein [Arabidopsis lyrata subsp]. lyrata] gi|297842751|ref|XP_002889257.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 2 | 10 | 9 | – | – | |
| Phobius | 11 | 15 | 5 | – | – | |
| Phobius | 16 | 720 | 705 | – | – | |
| PANTHER | 62 | 644 | 583 | 0 | – | |
| PANTHER | 62 | 644 | 583 | 0 | – | |
| CDD | 197 | 440 | 244 | 1.68E-95 | – | |
| SUPERFAMILY | 198 | 262 | 65 | 1.37E-26 | ||
| Pfam | 216 | 333 | 118 | 1.30E-31 | ||
| ProSiteProfiles | 227 | 557 | 331 | 11.001 | ||
| Gene3D | 237 | 263 | 27 | 6.90E-04 | – | |
| Gene3D | 296 | 309 | 14 | 6.90E-04 | – | |
| SUPERFAMILY | 301 | 440 | 140 | 1.37E-26 | ||
| Gene3D | 381 | 446 | 66 | 3.30E-06 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v1473560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1473560.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.