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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1666250 |
| Transcript ID | Lj3g3v1666250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc transporter 1-like [Glycine max] gi|356557891|ref|XP_003547243.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 33 | 33 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| SignalP | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 14 | 14 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 15 | 26 | 12 | – | – | |
| Phobius | 27 | 31 | 5 | – | – | |
| Phobius | 32 | 54 | 23 | – | – | |
| PANTHER | 36 | 344 | 309 | 9.90E-247 | – | |
| PANTHER | 36 | 344 | 309 | 9.90E-247 | – | |
| Pfam | 55 | 340 | 286 | 5.80E-51 | ||
| Phobius | 55 | 77 | 23 | – | – | |
| TMHMM | 55 | 77 | 23 | – | – | |
| Phobius | 78 | 83 | 6 | – | – | |
| TMHMM | 84 | 106 | 23 | – | – | |
| Phobius | 84 | 104 | 21 | – | – | |
| Phobius | 105 | 123 | 19 | – | – | |
| TMHMM | 121 | 143 | 23 | – | – | |
| Phobius | 124 | 144 | 21 | – | – | |
| Phobius | 145 | 193 | 49 | – | – | |
| Phobius | 194 | 213 | 20 | – | – | |
| TMHMM | 194 | 216 | 23 | – | – | |
| Phobius | 214 | 224 | 11 | – | – | |
| TMHMM | 221 | 243 | 23 | – | – | |
| Phobius | 225 | 243 | 19 | – | – | |
| Phobius | 244 | 254 | 11 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 255 | 274 | 20 | – | – | |
| Phobius | 275 | 285 | 11 | – | – | |
| Phobius | 286 | 304 | 19 | – | – | |
| TMHMM | 287 | 309 | 23 | – | – | |
| Phobius | 305 | 323 | 19 | – | – | |
| TMHMM | 322 | 343 | 22 | – | – | |
| Phobius | 324 | 343 | 20 | – | – | |
| Phobius | 344 | 344 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v1666250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1666250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.