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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2172640 |
| Transcript ID | Lj3g3v2172640.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TOPLESS-like [Glycine max] gi|356526242|ref|XP_003531727.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 589 | 589 | 0 | ||
| PANTHER | 1 | 589 | 589 | 0 | – | |
| Phobius | 1 | 527 | 527 | – | – | |
| MobiDBLite | 23 | 55 | 33 | – | – | |
| SMART | 93 | 132 | 40 | 15 | ||
| SUPERFAMILY | 94 | 415 | 322 | 2.85E-40 | ||
| Gene3D | 108 | 421 | 314 | 4.00E-42 | ||
| SMART | 149 | 193 | 45 | 45 | ||
| ProSiteProfiles | 161 | 426 | 266 | 18.616 | ||
| SMART | 199 | 240 | 42 | 5.30E-06 | ||
| ProSiteProfiles | 206 | 249 | 44 | 10.876 | ||
| Pfam | 206 | 240 | 35 | 1.40E-05 | ||
| ProSitePatterns | 227 | 241 | 15 | – | ||
| SMART | 243 | 284 | 42 | 0.13 | ||
| SMART | 287 | 330 | 44 | 19 | ||
| SMART | 333 | 373 | 41 | 1.1 | ||
| ProSiteProfiles | 351 | 382 | 32 | 9.071 | ||
| Phobius | 528 | 549 | 22 | – | – | |
| Phobius | 550 | 589 | 40 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj3g3v2172640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2172640.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.