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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2318150 |
| Transcript ID | Lj3g3v2318150.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: RNA polymerase II-associated factor 1 homolog [Cicer arietinum] gi|502156093|ref|XP_004510311.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 275 | 275 | – | – | |
| SUPERFAMILY | 133 | 291 | 159 | 1.88E-05 | – | |
| PANTHER | 141 | 561 | 421 | 2.40E-197 | – | |
| PANTHER | 141 | 561 | 421 | 2.40E-197 | ||
| Coils | 203 | 242 | 40 | – | – | |
| Pfam | 290 | 557 | 268 | 3.30E-46 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transcription elongation from RNA polymerase II promoter | The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II. | ||
| Biological process | Histone modification | The covalent alteration of one or more amino acid residues within a histone protein. | ||
| Cellular component | Cdc73/Paf1 complex | A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p. |
Expression pattern of Lj3g3v2318150.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2318150.2, powered by CORGI.
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