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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2476580 |
| Transcript ID | Lj3g3v2476580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nephrocystin-3-like [Glycine max] gi|356560262|ref|XP_003548412.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 471 | 469 | 0 | – | |
| PANTHER | 3 | 471 | 469 | 0 | – | |
| Pfam | 13 | 41 | 29 | 0.004 | ||
| ProSiteProfiles | 14 | 132 | 119 | 8.385 | ||
| Gene3D | 14 | 72 | 59 | 3.10E-06 | ||
| ProSiteProfiles | 14 | 47 | 34 | 5.93 | ||
| SMART | 14 | 47 | 34 | 37 | ||
| SUPERFAMILY | 19 | 138 | 120 | 1.04E-19 | ||
| SMART | 57 | 90 | 34 | 70 | ||
| ProSiteProfiles | 57 | 90 | 34 | 7.021 | ||
| Pfam | 59 | 86 | 28 | 0.084 | ||
| Gene3D | 73 | 198 | 126 | 3.20E-17 | ||
| Pfam | 98 | 133 | 36 | 0.0023 | ||
| SMART | 99 | 132 | 34 | 0.047 | ||
| ProSiteProfiles | 99 | 132 | 34 | 6.254 | ||
| Pfam | 180 | 254 | 75 | 8.40E-11 | – | |
| ProSiteProfiles | 181 | 214 | 34 | 8.201 | ||
| ProSiteProfiles | 181 | 424 | 244 | 16.334 | ||
| SMART | 181 | 214 | 34 | 2.3 | ||
| SUPERFAMILY | 187 | 427 | 241 | 1.04E-19 | ||
| Gene3D | 199 | 253 | 55 | 3.80E-08 | ||
| ProSiteProfiles | 223 | 256 | 34 | 7.139 | ||
| SMART | 223 | 256 | 34 | 0.011 | ||
| Gene3D | 265 | 423 | 159 | 1.20E-16 | ||
| SMART | 266 | 299 | 34 | 0.91 | ||
| ProSiteProfiles | 266 | 299 | 34 | 8.26 | ||
| ProSiteProfiles | 307 | 340 | 34 | 5.222 | ||
| SMART | 349 | 382 | 34 | 14 | ||
| ProSiteProfiles | 349 | 382 | 34 | 5.576 | ||
| Pfam | 351 | 422 | 72 | 5.80E-10 | – | |
| SMART | 391 | 424 | 34 | 13 | ||
| ProSiteProfiles | 391 | 424 | 34 | 6.933 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2476580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2476580.1, powered by CORGI.
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