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Lj3g3v2517580.1

Overview

Field Value
Gene ID Lj3g3v2517580
Transcript ID Lj3g3v2517580.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-like [Glycine max] gi|356559679|ref|XP_003548126.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11516
14 429 416 2.90E-256 –
PANTHER
PTHR11516:SF25
14 429 416 2.90E-256 –
SUPERFAMILY
SSF52518
80 408 329 8.25E-101
IPR029061
Gene3D
G3DSA:3.40.50.970
80 408 329 7.60E-131
IPR029061
TIGRFAM
TIGR03182
85 406 322 1.10E-140
IPR017597
CDD
cd02000
91 389 299 1.84E-151 –
Pfam
PF00676
96 395 300 7.10E-82
IPR001017
Coils
Coil
364 391 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004739
Molecular function Pyruvate dehydrogenase (acetyl-transferring) activity Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
Subterm of
GO:0006086
Biological process Acetyl-CoA biosynthetic process from pyruvate The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.
Subterm of
GO:0016624
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
Subterm of
GO:0043231
Cellular component Intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj3g3v2517580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2517580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.