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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2518940 |
| Transcript ID | Lj3g3v2518940.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | late elongated hypocotyl and circadian clock associated-1-like protein 1 [Glycine max] gi|351722167|ref|NP_001235187.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 145 | 145 | 7.30E-112 | – | |
| PANTHER | 1 | 145 | 145 | 7.30E-112 | – | |
| SUPERFAMILY | 19 | 75 | 57 | 1.79E-16 | ||
| ProSiteProfiles | 20 | 74 | 55 | 19.691 | ||
| Gene3D | 22 | 71 | 50 | 4.60E-08 | ||
| TIGRFAM | 23 | 72 | 50 | 2.20E-15 | ||
| SMART | 24 | 72 | 49 | 2.30E-12 | ||
| Pfam | 25 | 68 | 44 | 1.20E-13 | ||
| CDD | 27 | 70 | 44 | 1.09E-09 | – | |
| MobiDBLite | 89 | 130 | 42 | – | – | |
| MobiDBLite | 145 | 165 | 21 | – | – | |
| MobiDBLite | 327 | 356 | 30 | – | – | |
| PANTHER | 369 | 426 | 58 | 7.30E-112 | – | |
| PANTHER | 369 | 426 | 58 | 7.30E-112 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj3g3v2518940.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2518940.1, powered by CORGI.
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