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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2719910 |
| Transcript ID | Lj3g3v2719910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=CASP-like protein 1] gi|391738050|sp|P0DI58.1|CSPL1_LOTJA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 187 | 187 | 1.80E-97 | – | |
| PANTHER | 1 | 187 | 187 | 1.80E-97 | – | |
| Pfam | 24 | 171 | 148 | 2.50E-42 | ||
| TMHMM | 30 | 49 | 20 | – | – | |
| TIGRFAM | 30 | 183 | 154 | 3.70E-45 | ||
| Phobius | 30 | 50 | 21 | – | – | |
| Phobius | 51 | 69 | 19 | – | – | |
| Phobius | 70 | 98 | 29 | – | – | |
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 99 | 109 | 11 | – | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| Phobius | 110 | 135 | 26 | – | – | |
| Phobius | 136 | 162 | 27 | – | – | |
| TMHMM | 162 | 184 | 23 | – | – | |
| Phobius | 163 | 184 | 22 | – | – | |
| Phobius | 185 | 187 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v2719910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2719910.1, powered by CORGI.
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