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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2722600 |
| Transcript ID | Lj3g3v2722600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: BEACH domain-containing protein lvsC-like isoform X1 [Cicer arietinum] gi|502157839|ref|XP_004510928.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1191 | 1191 | 0 | – | |
| PANTHER | 1 | 1191 | 1191 | 0 | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Pfam | 2 | 153 | 152 | 1.60E-30 | ||
| Phobius | 7 | 15 | 9 | – | – | |
| Phobius | 16 | 24 | 9 | – | – | |
| Phobius | 25 | 1087 | 1063 | – | – | |
| MobiDBLite | 178 | 237 | 60 | – | – | |
| MobiDBLite | 957 | 977 | 21 | – | – | |
| Phobius | 1088 | 1106 | 19 | – | – | |
| Phobius | 1107 | 1453 | 347 | – | – | |
| PANTHER | 1229 | 1453 | 225 | 0 | – | |
| PANTHER | 1229 | 1453 | 225 | 0 | – | |
| MobiDBLite | 1242 | 1278 | 37 | – | – | |
| SUPERFAMILY | 1290 | 1400 | 111 | 1.05E-20 | ||
| CDD | 1290 | 1400 | 111 | 1.05E-27 | – | |
| Gene3D | 1291 | 1395 | 105 | 5.90E-20 | ||
| Pfam | 1299 | 1397 | 99 | 1.30E-27 | ||
| SUPERFAMILY | 1404 | 1453 | 50 | 1.44E-13 | ||
| ProSiteProfiles | 1412 | 1486 | 75 | 11.478 | ||
| Gene3D | 1415 | 1453 | 39 | 1.70E-11 | ||
| Pfam | 1425 | 1453 | 29 | 1.70E-08 | ||
| Phobius | 1454 | 1477 | 24 | – | – | |
| Phobius | 1478 | 1486 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v2722600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2722600.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.