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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2723660 |
| Transcript ID | Lj3g3v2723660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like [Glycine max] gi|356506341|ref|XP_003521943.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 48 | 34 | 0 | – | |
| PANTHER | 15 | 48 | 34 | 0 | – | |
| PANTHER | 93 | 373 | 281 | 0 | – | |
| PANTHER | 93 | 373 | 281 | 0 | – | |
| ProSiteProfiles | 110 | 145 | 36 | 6.401 | ||
| Gene3D | 111 | 137 | 27 | 3.30E-04 | ||
| Pfam | 115 | 136 | 22 | 0.41 | ||
| Gene3D | 171 | 172 | 2 | 3.30E-04 | ||
| ProSiteProfiles | 209 | 239 | 31 | 7.914 | ||
| Pfam | 214 | 239 | 26 | 0.0028 | ||
| ProSiteProfiles | 240 | 276 | 37 | 10.358 | ||
| Pfam | 242 | 273 | 32 | 0.0048 | ||
| ProSiteProfiles | 277 | 311 | 35 | 5.031 | ||
| ProSiteProfiles | 312 | 346 | 35 | 8.079 | ||
| Pfam | 315 | 343 | 29 | 0.44 | ||
| ProSiteProfiles | 408 | 438 | 31 | 5.996 | ||
| PANTHER | 409 | 664 | 256 | 0 | – | |
| PANTHER | 409 | 664 | 256 | 0 | – | |
| Gene3D | 411 | 482 | 72 | 3.30E-04 | ||
| Pfam | 413 | 435 | 23 | 0.22 | ||
| ProSiteProfiles | 439 | 469 | 31 | 7.826 | ||
| Pfam | 441 | 463 | 23 | 8.50E-05 | ||
| ProSiteProfiles | 473 | 509 | 37 | 5.459 | ||
| ProSiteProfiles | 510 | 540 | 31 | 7.07 | ||
| Gene3D | 538 | 637 | 100 | 3.30E-04 | ||
| ProSiteProfiles | 541 | 575 | 35 | 11.893 | ||
| Pfam | 543 | 589 | 47 | 6.20E-11 | ||
| TIGRFAM | 544 | 576 | 33 | 2.20E-08 | ||
| ProSiteProfiles | 576 | 606 | 31 | 9.865 | ||
| TIGRFAM | 578 | 612 | 35 | 7.00E-06 | ||
| ProSiteProfiles | 612 | 642 | 31 | 7.147 | ||
| Pfam | 615 | 638 | 24 | 0.038 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2723660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2723660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.