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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2733950 |
| Transcript ID | Lj3g3v2733950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Protein phosphatase 1 regulatory subunit [Medicago truncatula] gi|357520899|ref|XP_003630738.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 28 | 336 | 309 | 1.20E-62 | ||
| SUPERFAMILY | 40 | 336 | 297 | 2.28E-51 | ||
| PANTHER | 43 | 103 | 61 | 4.90E-50 | – | |
| SMART | 65 | 90 | 26 | 57 | – | |
| SMART | 65 | 85 | 21 | 28 | – | |
| SMART | 66 | 88 | 23 | 22 | ||
| ProSiteProfiles | 67 | 89 | 23 | 7.057 | ||
| PRINTS | 68 | 81 | 14 | 2.30E-05 | – | |
| ProSiteProfiles | 90 | 113 | 24 | 5.024 | ||
| SMART | 115 | 134 | 20 | 14 | – | |
| SMART | 115 | 139 | 25 | 0.18 | ||
| SMART | 115 | 136 | 22 | 100 | – | |
| ProSiteProfiles | 117 | 138 | 22 | 7.681 | ||
| PANTHER | 131 | 337 | 207 | 4.90E-50 | – | |
| SMART | 137 | 158 | 22 | 3.9 | – | |
| ProSiteProfiles | 139 | 160 | 22 | 6.796 | ||
| SMART | 160 | 181 | 22 | 0.66 | – | |
| ProSiteProfiles | 162 | 183 | 22 | 6.403 | ||
| SMART | 182 | 203 | 22 | 0.055 | – | |
| ProSiteProfiles | 184 | 205 | 22 | 7.412 | ||
| SMART | 204 | 224 | 21 | 28 | – | |
| SMART | 204 | 227 | 24 | 6.8 | ||
| ProSiteProfiles | 206 | 226 | 21 | 6.657 | ||
| SMART | 225 | 246 | 22 | 1.5 | – | |
| ProSiteProfiles | 227 | 248 | 22 | 6.68 | ||
| Pfam | 228 | 267 | 40 | 1.20E-06 | ||
| SMART | 247 | 268 | 22 | 0.17 | – | |
| ProSiteProfiles | 249 | 270 | 22 | 9.144 | ||
| SMART | 269 | 290 | 22 | 0.12 | – | |
| SMART | 269 | 290 | 22 | 12 | ||
| SMART | 269 | 288 | 20 | 100 | – | |
| PRINTS | 269 | 282 | 14 | 2.30E-05 | – | |
| Pfam | 271 | 310 | 40 | 6.10E-09 | ||
| ProSiteProfiles | 271 | 292 | 22 | 9.029 | ||
| SMART | 291 | 316 | 26 | 10 | ||
| SMART | 291 | 312 | 22 | 0.001 | – | |
| ProSiteProfiles | 293 | 314 | 22 | 7.835 | ||
| ProSiteProfiles | 320 | 341 | 22 | 5.64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2733950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2733950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.