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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2742950 |
| Transcript ID | Lj3g3v2742950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Glycine max] gi|356549980|ref|XP_003543368.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 75 | 75 | – | – | |
| PANTHER | 1 | 222 | 222 | 7.40E-148 | – | |
| PANTHER | 1 | 222 | 222 | 7.40E-148 | ||
| Hamap | 60 | 237 | 178 | 37.078 | ||
| Pfam | 67 | 104 | 38 | 1.70E-17 | ||
| SUPERFAMILY | 68 | 236 | 169 | 9.35E-32 | ||
| Gene3D | 69 | 236 | 168 | 9.50E-38 | ||
| Phobius | 76 | 97 | 22 | – | – | |
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 98 | 237 | 140 | – | – | |
| CDD | 112 | 237 | 126 | 1.17E-89 | – | |
| ProSiteProfiles | 124 | 220 | 97 | 21.513 | ||
| Pfam | 149 | 206 | 58 | 5.10E-12 | ||
| PRINTS | 161 | 172 | 12 | 1.50E-14 | ||
| PRINTS | 182 | 194 | 13 | 1.50E-14 | ||
| PRINTS | 194 | 206 | 13 | 1.50E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquinol-cytochrome-c reductase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+. | ||
| Molecular function | Plastoquinol--plastocyanin reductase activity | Catalysis of the reaction: 2 H(+)[side 1] + 2 oxidized plastocyanin + plastoquinol-1 = 2 H(+)[side 2] + 2 reduced plastocyanin + plastoquinone. This reaction involves the concomitant transfer of 2 H+ ions across a membrane. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on diphenols and related substances as donors | Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Cellular component | Thylakoid membrane | The pigmented membrane of any thylakoid. | ||
| Molecular function | Electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | Enables the directed movement of electrons within the cytochrome b6/f complex of photosystem II. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v2742950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2742950.1, powered by CORGI.
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