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Lj3g3v2823230.1

Overview

Field Value
Gene ID Lj3g3v2823230
Transcript ID Lj3g3v2823230.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Glycine max] gi|356517478|ref|XP_003527414.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD
cd10747
2 156 155 1.27E-47 –
Gene3D
G3DSA:2.60.260.20
2 76 75 3.20E-31 –
Pfam
PF01556
2 156 155 1.10E-42
IPR002939
SUPERFAMILY
SSF49493
2 88 87 4.97E-16
IPR008971
PANTHER
PTHR24078
3 173 171 4.30E-119 –
PANTHER
PTHR24078:SF188
3 173 171 4.30E-119 –
Gene3D
G3DSA:2.60.260.20
77 156 80 3.20E-25 –
SUPERFAMILY
SSF49493
79 165 87 2.09E-23
IPR008971

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj3g3v2823230.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2823230.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.