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Lj3g3v2995730.1

Overview

Field Value
Gene ID Lj3g3v2995730
Transcript ID Lj3g3v2995730.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] gi|356542728|ref|XP_003539817.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11011:SF25
1 188 188 3.20E-291 –
PANTHER
PTHR11011
1 188 188 3.20E-291
IPR026055
Gene3D
G3DSA:3.40.50.720
5 52 48 3.60E-32
IPR016040
SUPERFAMILY
SSF51735
6 168 163 1.91E-32
IPR016040
CDD
cd05236
13 362 350 2.92E-120 –
Pfam
PF07993
17 318 302 2.40E-77
IPR013120
Gene3D
G3DSA:3.40.50.720
97 178 82 3.60E-32
IPR016040
PANTHER
PTHR11011:SF25
213 491 279 3.20E-291 –
PANTHER
PTHR11011
213 491 279 3.20E-291
IPR026055
Gene3D
G3DSA:3.40.50.720
231 272 42 3.60E-32
IPR016040
SUPERFAMILY
SSF51735
233 339 107 1.91E-32
IPR016040
Gene3D
G3DSA:3.40.50.720
304 340 37 3.60E-32
IPR016040
CDD
cd09071
391 490 100 3.04E-17
IPR033640
Pfam
PF03015
393 491 99 2.10E-18
IPR033640

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0080019
Molecular function Fatty-acyl-CoA reductase (alcohol-forming) activity Catalysis of the reaction: a very long chain fatty acyl-CoA + NADPH + H+ = a very long chain primary alcohol + NADP+ + CoA.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj3g3v2995730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2995730.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.