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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3086090 |
| Transcript ID | Lj3g3v3086090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Beta-galactosidase 6 [Aegilops tauschii] gi|475579573|gb|EMT18371.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 290 | 290 | 2.00E-191 | ||
| PANTHER | 1 | 290 | 290 | 2.00E-191 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 17 | 23 | 7 | – | – | |
| Phobius | 24 | 303 | 280 | – | – | |
| Gene3D | 25 | 89 | 65 | 1.90E-26 | ||
| SUPERFAMILY | 26 | 217 | 192 | 8.89E-50 | ||
| Pfam | 33 | 89 | 57 | 3.20E-22 | ||
| PRINTS | 36 | 53 | 18 | 4.50E-18 | ||
| PRINTS | 57 | 75 | 19 | 4.50E-18 | ||
| Gene3D | 90 | 163 | 74 | 1.60E-18 | ||
| ProSitePatterns | 111 | 123 | 13 | – | ||
| Gene3D | 168 | 217 | 50 | 1.60E-13 | ||
| Pfam | 168 | 212 | 45 | 1.40E-13 | ||
| PRINTS | 176 | 191 | 16 | 4.50E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj3g3v3086090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3086090.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.