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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3120810 |
| Transcript ID | Lj3g3v3120810.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Chitinase [Medicago truncatula] gi|357499923|ref|XP_003620250.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| TMHMM | 4 | 26 | 23 | – | – | |
| PANTHER | 7 | 255 | 249 | 9.10E-131 | – | |
| PANTHER | 7 | 255 | 249 | 9.10E-131 | – | |
| Phobius | 8 | 18 | 11 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| PRINTS | 23 | 36 | 14 | 5.40E-08 | ||
| Phobius | 24 | 256 | 233 | – | – | |
| SUPERFAMILY | 25 | 250 | 226 | 1.43E-48 | ||
| CDD | 25 | 256 | 232 | 1.77E-115 | – | |
| Gene3D | 32 | 245 | 214 | 4.90E-32 | ||
| Pfam | 50 | 217 | 168 | 7.10E-19 | ||
| PRINTS | 69 | 84 | 16 | 5.40E-08 | ||
| PRINTS | 86 | 104 | 19 | 5.40E-08 | ||
| ProSitePatterns | 139 | 147 | 9 | – | ||
| PRINTS | 202 | 225 | 24 | 5.40E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj3g3v3120810.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3120810.2, powered by CORGI.
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