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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3337420 |
| Transcript ID | Lj3g3v3337420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Extra-large G-protein 1 [Theobroma cacao] gi|508699367|gb|EOX91263.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 296 | 360 | 65 | 6.60E-273 | ||
| PANTHER | 296 | 360 | 65 | 6.60E-273 | – | |
| SMART | 416 | 819 | 404 | 1.50E-13 | ||
| Pfam | 443 | 834 | 392 | 5.90E-59 | ||
| Gene3D | 444 | 469 | 26 | 6.80E-32 | ||
| PANTHER | 449 | 515 | 67 | 6.60E-273 | – | |
| PANTHER | 449 | 515 | 67 | 6.60E-273 | ||
| SUPERFAMILY | 449 | 475 | 27 | 1.07E-18 | ||
| PRINTS | 453 | 468 | 16 | 1.80E-06 | ||
| Gene3D | 470 | 510 | 41 | 1.60E-26 | ||
| SUPERFAMILY | 479 | 628 | 150 | 1.18E-20 | ||
| PANTHER | 541 | 644 | 104 | 6.60E-273 | ||
| PANTHER | 541 | 644 | 104 | 6.60E-273 | – | |
| Gene3D | 542 | 628 | 87 | 1.60E-26 | ||
| PRINTS | 618 | 640 | 23 | 1.80E-06 | ||
| Gene3D | 636 | 839 | 204 | 6.80E-32 | ||
| PANTHER | 660 | 848 | 189 | 6.60E-273 | ||
| PANTHER | 660 | 848 | 189 | 6.60E-273 | – | |
| SUPERFAMILY | 666 | 838 | 173 | 1.07E-18 | ||
| PRINTS | 689 | 717 | 29 | 1.80E-06 | ||
| PRINTS | 737 | 746 | 10 | 1.80E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Biological process | G protein-coupled receptor signaling pathway | A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576). | ||
| Molecular function | Guanyl nucleotide binding | Interacting selectively and non-covalently with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate. | ||
| Molecular function | G-protein beta/gamma-subunit complex binding | Interacting selectively and non-covalently with a complex of G-protein beta/gamma subunits. |
Expression pattern of Lj3g3v3337420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3337420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.