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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3338010 |
| Transcript ID | Lj3g3v3338010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Cicer arietinum] gi|502149199|ref|XP_004507432.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 302 | 301 | 1.60E-118 | – | |
| PANTHER | 2 | 302 | 301 | 1.60E-118 | – | |
| ProSiteProfiles | 10 | 44 | 35 | 6.511 | ||
| ProSiteProfiles | 59 | 93 | 35 | 9.843 | ||
| Gene3D | 60 | 257 | 198 | 1.90E-06 | ||
| TIGRFAM | 61 | 94 | 34 | 1.10E-05 | ||
| Pfam | 62 | 91 | 30 | 3.50E-05 | ||
| Pfam | 94 | 142 | 49 | 6.10E-16 | ||
| ProSiteProfiles | 94 | 128 | 35 | 13.691 | ||
| TIGRFAM | 96 | 130 | 35 | 1.70E-11 | ||
| ProSiteProfiles | 129 | 163 | 35 | 11.718 | ||
| TIGRFAM | 131 | 162 | 32 | 1.40E-07 | ||
| ProSiteProfiles | 164 | 198 | 35 | 10.972 | ||
| Pfam | 166 | 211 | 46 | 2.10E-08 | ||
| TIGRFAM | 167 | 200 | 34 | 8.80E-08 | ||
| ProSiteProfiles | 199 | 234 | 36 | 7.859 | ||
| ProSiteProfiles | 235 | 269 | 35 | 10.797 | ||
| TIGRFAM | 238 | 269 | 32 | 7.60E-05 | ||
| Pfam | 238 | 267 | 30 | 7.80E-05 | ||
| ProSiteProfiles | 270 | 304 | 35 | 7.969 | ||
| Pfam | 273 | 300 | 28 | 0.013 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v3338010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3338010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.