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Lj3g3v3338170.1

Overview

Field Value
Gene ID Lj3g3v3338170
Transcript ID Lj3g3v3338170.1
Lotus japonicus genome version MG20 v3.0
Description nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF46458
7 157 151 8.51E-44
IPR009050
CDD
cd14784
9 157 149 1.11E-92 –
PANTHER
PTHR22924
9 161 153 6.00E-97 –
ProSiteProfiles
PS01033
9 157 149 28.202
IPR000971
Gene3D
G3DSA:1.10.490.10
9 157 149 4.20E-44
IPR012292
PRINTS
PR00188
10 27 18 1.90E-44
IPR001032
Pfam
PF00042
13 121 109 3.10E-20
IPR000971
PRINTS
PR00188
35 55 21 1.90E-44
IPR001032
PRINTS
PR00188
63 91 29 1.90E-44
IPR001032
ProSitePatterns
PS00208
63 74 12 –
IPR019824
PRINTS
PR00188
128 154 27 1.90E-44
IPR001032

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0019825
Molecular function Oxygen binding Interacting selectively and non-covalently with oxygen (O2).
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj3g3v3338170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3338170.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.