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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019824
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.863s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v3338170.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1| chr3 40832952 40834413 -
2 domain predictions
2 GO terms
Lj3g3v3338180.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1| chr3 40836056 40838392 -
2 domain predictions
2 GO terms
Lj4g3v0353430.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1| chr4 4711149 4713485 +
2 domain predictions
2 GO terms
Lj4g3v0353440.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1| chr4 4715176 4716187 +
2 domain predictions
2 GO terms
Lj5g3v0035290.1
n.a. leghemoglobin [Lotus japonicus] gi|77799650|dbj|BAE46737.1| chr5 102831 120467 -
2 domain predictions
2 GO terms
Lj5g3v0035290.2
n.a. leghemoglobin [Lotus japonicus] gi|77799648|dbj|BAE46736.1| chr5 119666 120461 -
2 domain predictions
2 GO terms
Lj5g3v0465970.1
n.a. RecName: Full=Leghemoglobingi|11230993|dbj|BAB18108.1| leghemoglobin [Lotus japonicus] gi|20138517|sp|Q9FEP8.1|LGB_LOTJA chr5 4480835 4482438 +
2 domain predictions
2 GO terms
LotjaGi3g1v0504500.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F4|Q3C1F4_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504500 LjG1.1_chr3 92242512 92245846 -
2 domain predictions
2 GO terms
LotjaGi3g1v0504600.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F3|Q3C1F3_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504600 LjG1.1_chr3 92246168 92248745 -
2 domain predictions
2 GO terms
LotjaGi5g1v0024700.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F7|Q3C1F7_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024700 LjG1.1_chr5 4294209 4295695 +
2 domain predictions
2 GO terms
LotjaGi5g1v0024900.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F6|Q3C1F6_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024900 LjG1.1_chr5 4310694 4316382 +
2 domain predictions
2 GO terms
LotjaGi5g1v0046500.1
n.a. Non-symbiotic hemoglobin; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F5|Q3C1F5_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0046500 LjG1.1_chr5 7873443 7877903 -
2 domain predictions
2 GO terms