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PF00042

Source: Pfam

Description

Globin

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
Lj3g3v3338170.1
– Nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1|
Domains
13
Lj3g3v3338180.1
– Nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1|
Domains
12
Lj4g3v0353430.1
– Nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1|
Domains
12
Lj4g3v0353440.1
– Nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1|
Domains
13
Lj5g3v0035290.1
– Leghemoglobin [Lotus japonicus] gi|77799650|dbj|BAE46737.1|
Domains
13
Lj5g3v0035290.2
– Leghemoglobin [Lotus japonicus] gi|77799648|dbj|BAE46736.1|
Domains
13
Lj5g3v0465970.1
– RecName: Full=Leghemoglobingi|11230993|dbj|BAB18108.1| leghemoglobin [Lotus japonicus] gi|20138517|sp|Q9FEP8.1|LGB_LOTJA
Domains
13
Lj5g3v1699110.1
– PREDICTED: leghemoglobin-like [Cicer arietinum] gi|502118192|ref|XP_004496145.1|
Domains
11
LotjaGi3g1v0504500.1
– Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F4|Q3C1F4_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504500
Domains
14
LotjaGi3g1v0504600.1
– Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F3|Q3C1F3_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504600
Domains
13
LotjaGi5g1v0024700.1
– Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F7|Q3C1F7_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024700
Domains
13
LotjaGi5g1v0024900.1
– Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F6|Q3C1F6_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024900
Domains
13
LotjaGi5g1v0046500.1
– Non-symbiotic hemoglobin; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F5|Q3C1F5_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0046500
Domains
13
LotjaGi5g1v0253200.1
– Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|P14848|LGB2_SESRO Leghemoglobin 2; TrEMBL-Plants: tr|B3SGL5|B3SGL5_MEDTR Leghemoglobin Lb120-1; Found in the gene: LotjaGi5g1v0253200
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd08923 CDD 1 7.14