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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3475560 |
| Transcript ID | Lj3g3v3475560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | major facilitator family protein [Arabidopsis thaliana] gi|15236224|ref|NP_195221.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 73 | 73 | – | – | |
| PANTHER | 8 | 540 | 533 | 9.10E-276 | – | |
| PANTHER | 8 | 540 | 533 | 9.10E-276 | – | |
| Pfam | 13 | 261 | 249 | 3.10E-90 | ||
| Gene3D | 15 | 202 | 188 | 1.00E-07 | – | |
| SUPERFAMILY | 38 | 208 | 171 | 1.83E-24 | ||
| Phobius | 74 | 96 | 23 | – | – | |
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 97 | 107 | 11 | – | – | |
| Phobius | 108 | 134 | 27 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 135 | 145 | 11 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 146 | 168 | 23 | – | – | |
| Phobius | 169 | 173 | 5 | – | – | |
| TMHMM | 172 | 194 | 23 | – | – | |
| Phobius | 174 | 193 | 20 | – | – | |
| Phobius | 194 | 212 | 19 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 213 | 234 | 22 | – | – | |
| Phobius | 235 | 239 | 5 | – | – | |
| Phobius | 240 | 265 | 26 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 266 | 328 | 63 | – | – | |
| SUPERFAMILY | 311 | 527 | 217 | 1.83E-24 | ||
| Gene3D | 328 | 525 | 198 | 1.80E-12 | – | |
| Phobius | 329 | 347 | 19 | – | – | |
| TMHMM | 329 | 348 | 20 | – | – | |
| CDD | 329 | 520 | 192 | 1.41E-04 | ||
| Phobius | 348 | 352 | 5 | – | – | |
| TMHMM | 353 | 375 | 23 | – | – | |
| Phobius | 353 | 375 | 23 | – | – | |
| Phobius | 376 | 395 | 20 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 396 | 415 | 20 | – | – | |
| Phobius | 416 | 420 | 5 | – | – | |
| Phobius | 421 | 442 | 22 | – | – | |
| TMHMM | 422 | 444 | 23 | – | – | |
| Phobius | 443 | 453 | 11 | – | – | |
| Phobius | 454 | 479 | 26 | – | – | |
| TMHMM | 457 | 479 | 23 | – | – | |
| Phobius | 480 | 498 | 19 | – | – | |
| TMHMM | 499 | 521 | 23 | – | – | |
| Phobius | 499 | 520 | 22 | – | – | |
| Phobius | 521 | 547 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3475560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3475560.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.