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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3475710 |
| Transcript ID | Lj3g3v3475710.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: thaumatin-like protein 1-like isoform X1 [Cicer arietinum] gi|502144865|ref|XP_004505776.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 303 | 303 | 3.00E-211 | ||
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 303 | 303 | 3.00E-211 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 4 | 19 | 16 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| ProSiteProfiles | 24 | 247 | 224 | 41.695 | ||
| Phobius | 25 | 286 | 262 | – | – | |
| SUPERFAMILY | 26 | 247 | 222 | 1.44E-79 | ||
| Gene3D | 26 | 247 | 222 | 1.60E-80 | ||
| PRINTS | 26 | 38 | 13 | 1.20E-17 | ||
| CDD | 26 | 246 | 221 | 1.85E-111 | – | |
| SMART | 27 | 247 | 221 | 3.70E-107 | ||
| Pfam | 31 | 247 | 217 | 1.10E-80 | ||
| PRINTS | 74 | 85 | 12 | 1.20E-17 | ||
| PRINTS | 87 | 116 | 30 | 1.20E-17 | ||
| PRINTS | 125 | 141 | 17 | 1.20E-17 | ||
| PRINTS | 237 | 246 | 10 | 1.20E-17 | ||
| Phobius | 287 | 308 | 22 | – | – | |
| Phobius | 309 | 310 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v3475710.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3475710.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.