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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3527150 |
| Transcript ID | Lj3g3v3527150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 21 | 48 | 28 | – | – | |
| PANTHER | 49 | 334 | 286 | 9.60E-245 | – | |
| PANTHER | 49 | 334 | 286 | 9.60E-245 | – | |
| Gene3D | 54 | 303 | 250 | 9.60E-116 | – | |
| ProSiteProfiles | 54 | 334 | 281 | 54.273 | ||
| SUPERFAMILY | 56 | 307 | 252 | 2.09E-97 | – | |
| CDD | 56 | 303 | 248 | 1.79E-135 | – | |
| Pfam | 59 | 329 | 271 | 5.80E-119 | ||
| PRINTS | 133 | 144 | 12 | 2.10E-13 | ||
| PRINTS | 261 | 272 | 12 | 2.10E-13 | ||
| PRINTS | 288 | 301 | 14 | 2.10E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Alanine-tRNA ligase activity | Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Alanyl-tRNA aminoacylation | The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA. |
Expression pattern of Lj3g3v3527150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3527150.1, powered by CORGI.
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