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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018165
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.982s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0126969.1
n.a. Alanyl-tRNA synthetase, partial [Medicago truncatula] gi|357497975|ref|XP_003619276.1| chr0 57208077 57210272 -
2 domain predictions
4 GO terms
Lj0g3v0206279.1
n.a. PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| chr0 102750027 102751241 -
2 domain predictions
4 GO terms
Lj0g3v0320209.1
n.a. PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| chr0 167121768 167125412 +
2 domain predictions
4 GO terms
Lj1g3v3330180.1
n.a. PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| chr1 37941452 37954161 -
2 domain predictions
4 GO terms
Lj1g3v3330180.2
n.a. PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| chr1 37941452 37957052 -
2 domain predictions
4 GO terms
Lj1g3v3330180.3
n.a. PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cicer arietinum] gi|502130599|ref|XP_004500706.1| chr1 37941452 37957258 -
2 domain predictions
4 GO terms
Lj3g3v3527150.1
n.a. PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| chr3 43018338 43022290 -
2 domain predictions
4 GO terms
LotjaGi1g1v0556500.1
n.a. Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 LjG1.1_chr1 108857917 108866016 -
2 domain predictions
4 GO terms
LotjaGi1g1v0556500.2
n.a. Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 LjG1.1_chr1 108860260 108865746 -
2 domain predictions
4 GO terms
LotjaGi3g1v0313900.1
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|G7JNH3|G7JNH3_MEDTR Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0313900 LjG1.1_chr3 66424910 66438064 -
2 domain predictions
4 GO terms
LotjaGi3g1v0313900.2
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|G7JNH3|G7JNH3_MEDTR Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0313900 LjG1.1_chr3 66424910 66438089 -
2 domain predictions
4 GO terms
LotjaGi3g1v0527600.1
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 LjG1.1_chr3 94396706 94414668 +
2 domain predictions
4 GO terms
LotjaGi3g1v0527600.2
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|A0A0S3SE77|A0A0S3SE77_PHAAN Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 LjG1.1_chr3 94396787 94413472 +
2 domain predictions
4 GO terms
LotjaGi3g1v0527600.3
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 LjG1.1_chr3 94396787 94413472 +
2 domain predictions
4 GO terms
LotjaGi3g1v0527600.4
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 LjG1.1_chr3 94396812 94412994 +
2 domain predictions
4 GO terms
LotjaGi3g1v0527600.5
n.a. Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 LjG1.1_chr3 94396812 94413472 +
2 domain predictions
4 GO terms
LotjaGi4g1v0341800.1
n.a. Alanine--tRNA ligase; TAIR: AT3G16565.2 threonyl and alanyl tRNA synthetase second additional domain-containing protein; Swiss-Prot: sp|O57734|ALAXL_PYRHO Alanyl-tRNA editing protein AlaX-L; TrEMBL-Plants: tr|I3T4Y8|I3T4Y8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0341800 LjG1.1_chr4 72151757 72157617 +
2 domain predictions
4 GO terms
LotjaGi4g1v0341800.2
n.a. Alanine--tRNA ligase; TAIR: AT3G16565.2 threonyl and alanyl tRNA synthetase second additional domain-containing protein; Swiss-Prot: sp|O57734|ALAXL_PYRHO Alanyl-tRNA editing protein AlaX-L; TrEMBL-Plants: tr|I3T4Y8|I3T4Y8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0341800 LjG1.1_chr4 72154039 72156499 +
2 domain predictions
4 GO terms