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tRNA synthetases class II (A)
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Alanine-tRNA ligase activity | Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Alanyl-tRNA aminoacylation | The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Alanyl-tRNA synthetase, partial [Medicago truncatula] gi|357497975|ref|XP_003619276.1| | 10 | ||
| – | PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| | 10 | ||
| – | PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| | 8 | ||
| – | PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| | 6 | ||
| – | PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| | 28 | ||
| – | PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| | 28 | ||
| – | PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cicer arietinum] gi|502130599|ref|XP_004500706.1| | 13 | ||
| – | PREDICTED: alanine--tRNA ligase-like [Cicer arietinum] gi|502144716|ref|XP_004505726.1| | 12 | ||
| – | Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 | 32 | ||
| – | Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 | 32 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|G7JNH3|G7JNH3_MEDTR Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0313900 | 30 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|G7JNH3|G7JNH3_MEDTR Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0313900 | 30 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 | 31 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|A0A0S3SE77|A0A0S3SE77_PHAAN Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 | 31 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 | 27 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 | 30 | ||
| – | Alanine--tRNA ligase; TAIR: AT1G50200.1 Alanyl-tRNA synthetase; Swiss-Prot: sp|P36428|SYA_ARATH Alanine--tRNA ligase; TrEMBL-Plants: tr|V7AHV6|V7AHV6_PHAVU Alanine--tRNA ligase; Found in the gene: LotjaGi3g1v0527600 | 31 | ||
| – | Alanine--tRNA ligase; TAIR: AT3G16565.2 threonyl and alanyl tRNA synthetase second additional domain-containing protein; Swiss-Prot: sp|O57734|ALAXL_PYRHO Alanyl-tRNA editing protein AlaX-L; TrEMBL-Plants: tr|I3T4Y8|I3T4Y8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0341800 | 14 | ||
| – | Alanine--tRNA ligase; TAIR: AT3G16565.2 threonyl and alanyl tRNA synthetase second additional domain-containing protein; Swiss-Prot: sp|O57734|ALAXL_PYRHO Alanyl-tRNA editing protein AlaX-L; TrEMBL-Plants: tr|I3T4Y8|I3T4Y8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0341800 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF55186 | SUPERFAMILY | 1 | 5.26 |