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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3639610 |
| Transcript ID | Lj3g3v3639610.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cellulose synthase-like protein D3-like isoform X1 [Cicer arietinum] gi|502144164|ref|XP_004505600.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | – | – | |
| Phobius | 1 | 287 | 287 | – | – | |
| Gene3D | 115 | 188 | 74 | 5.50E-17 | ||
| SUPERFAMILY | 117 | 185 | 69 | 5.42E-09 | – | |
| PANTHER | 131 | 501 | 371 | 0 | – | |
| PANTHER | 131 | 501 | 371 | 0 | – | |
| Pfam | 133 | 182 | 50 | 1.20E-13 | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 288 | 309 | 22 | – | – | |
| Phobius | 310 | 320 | 11 | – | – | |
| Phobius | 321 | 340 | 20 | – | – | |
| TMHMM | 321 | 340 | 20 | – | – | |
| Phobius | 341 | 921 | 581 | – | – | |
| Pfam | 379 | 1138 | 760 | 0 | ||
| SUPERFAMILY | 394 | 439 | 46 | 5.77E-05 | ||
| Coils | 504 | 524 | 21 | – | – | |
| PANTHER | 532 | 735 | 204 | 0 | – | |
| PANTHER | 532 | 735 | 204 | 0 | – | |
| SUPERFAMILY | 598 | 741 | 144 | 5.77E-05 | ||
| PANTHER | 755 | 1137 | 383 | 0 | – | |
| PANTHER | 755 | 1137 | 383 | 0 | – | |
| Phobius | 922 | 946 | 25 | – | – | |
| TMHMM | 926 | 948 | 23 | – | – | |
| Phobius | 947 | 951 | 5 | – | – | |
| Phobius | 952 | 978 | 27 | – | – | |
| TMHMM | 961 | 980 | 20 | – | – | |
| Phobius | 979 | 1054 | 76 | – | – | |
| TMHMM | 995 | 1017 | 23 | – | – | |
| TMHMM | 1047 | 1069 | 23 | – | – | |
| Phobius | 1055 | 1074 | 20 | – | – | |
| Phobius | 1075 | 1079 | 5 | – | – | |
| TMHMM | 1079 | 1101 | 23 | – | – | |
| Phobius | 1080 | 1101 | 22 | – | – | |
| Phobius | 1102 | 1112 | 11 | – | – | |
| Phobius | 1113 | 1133 | 21 | – | – | |
| TMHMM | 1114 | 1133 | 20 | – | – | |
| Phobius | 1134 | 1149 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Cellulose synthase (UDP-forming) activity | Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1). | ||
| Biological process | Cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. |
Expression pattern of Lj3g3v3639610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3639610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.