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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0151610 |
| Transcript ID | Lj4g3v0151610.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | pentatricopeptide repeat-containing protein [Cucumis melo subsp]. melo] gi|307136214|gb|ADN34051.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 403 | 390 | 7.50E-150 | – | |
| Pfam | 15 | 35 | 21 | 0.47 | ||
| Pfam | 45 | 94 | 50 | 4.70E-15 | ||
| ProSiteProfiles | 46 | 80 | 35 | 12.54 | ||
| TIGRFAM | 48 | 82 | 35 | 2.90E-07 | ||
| ProSiteProfiles | 81 | 115 | 35 | 12.321 | ||
| Gene3D | 82 | 355 | 274 | 4.70E-08 | ||
| TIGRFAM | 84 | 117 | 34 | 1.40E-09 | ||
| Pfam | 115 | 164 | 50 | 7.70E-14 | ||
| ProSiteProfiles | 116 | 150 | 35 | 10.709 | ||
| TIGRFAM | 118 | 151 | 34 | 5.80E-07 | ||
| SUPERFAMILY | 125 | 356 | 232 | 4.18E-08 | – | |
| ProSiteProfiles | 151 | 185 | 35 | 9.251 | ||
| Pfam | 186 | 234 | 49 | 1.10E-09 | ||
| ProSiteProfiles | 186 | 220 | 35 | 10.282 | ||
| TIGRFAM | 189 | 222 | 34 | 4.70E-05 | ||
| ProSiteProfiles | 221 | 255 | 35 | 9.854 | ||
| TIGRFAM | 226 | 256 | 31 | 2.40E-05 | ||
| ProSiteProfiles | 256 | 286 | 31 | 8.561 | ||
| TIGRFAM | 259 | 288 | 30 | 5.20E-04 | ||
| Pfam | 259 | 287 | 29 | 0.028 | ||
| ProSiteProfiles | 290 | 324 | 35 | 11.838 | ||
| Pfam | 290 | 338 | 49 | 9.20E-15 | ||
| TIGRFAM | 293 | 325 | 33 | 1.20E-06 | ||
| ProSiteProfiles | 325 | 359 | 35 | 12.77 | ||
| TIGRFAM | 327 | 361 | 35 | 4.30E-10 | ||
| Pfam | 359 | 402 | 44 | 3.30E-08 | ||
| ProSiteProfiles | 360 | 394 | 35 | 9.821 | ||
| TIGRFAM | 362 | 395 | 34 | 5.70E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0151610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0151610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.