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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0166210 |
| Transcript ID | Lj4g3v0166210.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356525018|ref|XP_003531124.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 114 | 114 | – | – | |
| PANTHER | 12 | 584 | 573 | 0 | ||
| PANTHER | 12 | 584 | 573 | 0 | – | |
| SUPERFAMILY | 42 | 260 | 219 | 6.67E-30 | ||
| Gene3D | 59 | 249 | 191 | 2.00E-10 | – | |
| CDD | 65 | 254 | 190 | 2.31E-07 | ||
| Phobius | 115 | 137 | 23 | – | – | |
| Pfam | 115 | 545 | 431 | 1.80E-135 | ||
| TMHMM | 117 | 139 | 23 | – | – | |
| Phobius | 138 | 156 | 19 | – | – | |
| Phobius | 157 | 176 | 20 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 177 | 204 | 28 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| Phobius | 205 | 224 | 20 | – | – | |
| Phobius | 225 | 229 | 5 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 230 | 250 | 21 | – | – | |
| Phobius | 251 | 352 | 102 | – | – | |
| SUPERFAMILY | 324 | 584 | 261 | 6.67E-30 | ||
| TMHMM | 352 | 374 | 23 | – | – | |
| Phobius | 353 | 374 | 22 | – | – | |
| Phobius | 375 | 393 | 19 | – | – | |
| TMHMM | 394 | 416 | 23 | – | – | |
| Phobius | 394 | 414 | 21 | – | – | |
| Phobius | 415 | 434 | 20 | – | – | |
| Phobius | 435 | 458 | 24 | – | – | |
| TMHMM | 436 | 458 | 23 | – | – | |
| Phobius | 459 | 477 | 19 | – | – | |
| TMHMM | 478 | 500 | 23 | – | – | |
| Phobius | 478 | 500 | 23 | – | – | |
| Phobius | 501 | 511 | 11 | – | – | |
| Phobius | 512 | 537 | 26 | – | – | |
| TMHMM | 513 | 535 | 23 | – | – | |
| Phobius | 538 | 556 | 19 | – | – | |
| TMHMM | 555 | 577 | 23 | – | – | |
| Phobius | 557 | 576 | 20 | – | – | |
| Phobius | 577 | 586 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0166210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0166210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.