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Lj4g3v0176460.1

Overview

Field Value
Gene ID Lj4g3v0176460
Transcript ID Lj4g3v0176460.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155:SF543
1 110 110 1.60E-133 –
PANTHER
PTHR23155
1 110 110 1.60E-133 –
ProSiteProfiles
PS51153
2 150 149 11.2
IPR008808
Pfam
PF05659
3 138 136 2.80E-19
IPR008808
PANTHER
PTHR23155:SF543
139 508 370 1.60E-133 –
PANTHER
PTHR23155
139 508 370 1.60E-133 –
SUPERFAMILY
SSF52540
156 413 258 2.61E-36
IPR027417
Pfam
PF00931
169 434 266 2.00E-29
IPR002182
Gene3D
G3DSA:3.40.50.300
184 278 95 8.20E-07
IPR027417
PRINTS
PR00364
186 201 16 6.80E-11 –
PRINTS
PR00364
264 278 15 6.80E-11 –
PRINTS
PR00364
351 365 15 6.80E-11 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 25

Expression data

Expression pattern

Expression pattern of Lj4g3v0176460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0176460.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.