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Lj4g3v0244030.1

Overview

Field Value
Gene ID Lj4g3v0244030
Transcript ID Lj4g3v0244030.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 11-like [Glycine max] gi|356510798|ref|XP_003524121.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
TIGRFAM 1 604 604 9.30E-191
Pfam 1 438 438 1.50E-150
PANTHER 1 605 605 0
PANTHER 1 605 605 0
Phobius 1 27 27
Phobius 28 45 18
TMHMM 30 52 23
Phobius 46 56 11
Phobius 57 79 23
TMHMM 62 84 23
Phobius 80 104 25
Phobius 105 124 20
TMHMM 105 124 20
Phobius 125 135 11
TMHMM 134 156 23
Phobius 136 156 21
Phobius 157 175 19
Phobius 176 203 28
TMHMM 176 198 23
Phobius 204 223 20
TMHMM 224 246 23
Phobius 224 246 23
Phobius 247 257 11
Phobius 258 279 22
TMHMM 259 281 23
Phobius 280 285 6
TMHMM 286 308 23
Phobius 286 308 23
Phobius 309 313 5
TMHMM 313 335 23
Phobius 314 336 23
Phobius 337 347 11
Phobius 348 371 24
TMHMM 350 372 23
Phobius 372 390 19
TMHMM 385 407 23
Phobius 391 409 19
Phobius 410 605 196

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj4g3v0244030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0244030.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.