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Lj4g3v0244030.2

Overview

Field Value
Gene ID Lj4g3v0244030
Transcript ID Lj4g3v0244030.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 11-like [Glycine max] gi|356528128|ref|XP_003532657.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 43 43
PANTHER 9 791 783 0
PANTHER 9 791 783 0
Phobius 44 66 23
TMHMM 44 66 23
TIGRFAM 52 790 739 7.20E-243
Pfam 54 624 571 5.60E-190
Phobius 67 85 19
TMHMM 86 108 23
Phobius 86 107 22
Phobius 108 174 67
Phobius 175 194 20
TMHMM 177 199 23
Phobius 195 213 19
Phobius 214 231 18
TMHMM 214 236 23
Phobius 232 242 11
TMHMM 243 265 23
Phobius 243 265 23
Phobius 266 290 25
Phobius 291 310 20
TMHMM 291 313 23
Phobius 311 321 11
TMHMM 320 342 23
Phobius 322 342 21
Phobius 343 361 19
Phobius 362 389 28
TMHMM 362 384 23
Phobius 390 409 20
Phobius 410 432 23
TMHMM 411 433 23
Phobius 433 443 11
TMHMM 443 465 23
Phobius 444 465 22
Phobius 466 471 6
Phobius 472 494 23
TMHMM 472 494 23
Phobius 495 499 5
TMHMM 499 521 23
Phobius 500 522 23
Phobius 523 533 11
TMHMM 533 555 23
Phobius 534 557 24
Phobius 558 576 19
TMHMM 570 592 23
Phobius 577 595 19
Phobius 596 791 196

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj4g3v0244030.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0244030.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.