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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0336910 |
| Transcript ID | Lj4g3v0336910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cicer arietinum] gi|502142062|ref|XP_004504774.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 40 | 40 | – | – | |
| SignalP | 1 | 33 | 33 | – | – | |
| Phobius | 1 | 33 | 33 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| ProSiteProfiles | 1 | 28 | 28 | 5 | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 13 | 28 | 16 | – | – | |
| PANTHER | 21 | 542 | 522 | 0 | ||
| PANTHER | 21 | 542 | 522 | 0 | – | |
| Phobius | 29 | 33 | 5 | – | – | |
| Phobius | 34 | 542 | 509 | – | – | |
| SUPERFAMILY | 54 | 408 | 355 | 1.05E-89 | ||
| Gene3D | 54 | 381 | 328 | 7.00E-107 | ||
| Pfam | 121 | 362 | 242 | 1.90E-36 | ||
| PRINTS | 125 | 144 | 20 | 8.60E-07 | ||
| PRINTS | 215 | 231 | 17 | 8.60E-07 | ||
| PRINTS | 289 | 307 | 19 | 8.60E-07 | ||
| Gene3D | 395 | 542 | 148 | 3.20E-30 | ||
| SUPERFAMILY | 409 | 541 | 133 | 5.75E-19 | ||
| Pfam | 409 | 540 | 132 | 8.20E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj4g3v0336910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0336910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.