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Lj4g3v0341070.1

Overview

Field Value
Gene ID Lj4g3v0341070
Transcript ID Lj4g3v0341070.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 7-like [Glycine max] gi|356524834|ref|XP_003531033.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 216 216
MobiDBLite 73 122 50
PANTHER 138 928 791 0
PANTHER 138 928 791 0
TMHMM 180 202 23
TIGRFAM 182 927 746 2.30E-224
Pfam 184 756 573 2.40E-168
Phobius 217 243 27
TMHMM 217 239 23
Phobius 244 307 64
Phobius 308 330 23
TMHMM 308 330 23
Phobius 331 349 19
TMHMM 345 363 19
Phobius 350 366 17
Phobius 367 372 6
Phobius 373 397 25
TMHMM 375 397 23
Phobius 398 422 25
Phobius 423 442 20
TMHMM 425 447 23
Phobius 443 453 11
Phobius 454 474 21
TMHMM 454 476 23
Phobius 475 493 19
TMHMM 486 508 23
Phobius 494 513 20
Phobius 514 545 32
TMHMM 544 566 23
Phobius 546 569 24
Phobius 570 574 5
Phobius 575 597 23
TMHMM 576 598 23
Phobius 598 603 6
TMHMM 603 621 19
Phobius 604 625 22
Phobius 626 630 5
Phobius 631 652 22
TMHMM 631 653 23
Phobius 653 672 20
Phobius 673 689 17
Phobius 690 708 19
Phobius 709 727 19
Phobius 728 928 201

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj4g3v0341070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0341070.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.