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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0353490 |
| Transcript ID | Lj4g3v0353490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Glycine max] gi|356538835|ref|XP_003537906.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 114 | 111 | 1.10E-155 | – | |
| PANTHER | 4 | 114 | 111 | 1.10E-155 | – | |
| ProSiteProfiles | 100 | 130 | 31 | 5.02 | ||
| Gene3D | 117 | 134 | 18 | 6.40E-06 | ||
| PANTHER | 143 | 488 | 346 | 1.10E-155 | – | |
| PANTHER | 143 | 488 | 346 | 1.10E-155 | – | |
| ProSiteProfiles | 160 | 195 | 36 | 7.509 | ||
| ProSiteProfiles | 196 | 230 | 35 | 6.511 | ||
| ProSiteProfiles | 245 | 279 | 35 | 9.843 | ||
| Gene3D | 246 | 316 | 71 | 6.40E-06 | ||
| TIGRFAM | 247 | 280 | 34 | 2.20E-05 | ||
| Pfam | 248 | 276 | 29 | 6.50E-05 | ||
| ProSiteProfiles | 280 | 314 | 35 | 13.691 | ||
| TIGRFAM | 282 | 316 | 35 | 3.20E-11 | ||
| Pfam | 287 | 328 | 42 | 1.10E-13 | ||
| ProSiteProfiles | 315 | 349 | 35 | 11.718 | ||
| TIGRFAM | 317 | 348 | 32 | 2.60E-07 | ||
| ProSiteProfiles | 350 | 384 | 35 | 9.525 | ||
| TIGRFAM | 353 | 386 | 34 | 4.30E-04 | ||
| ProSiteProfiles | 385 | 420 | 36 | 7.859 | ||
| Gene3D | 386 | 415 | 30 | 6.40E-06 | ||
| ProSiteProfiles | 421 | 455 | 35 | 10.797 | ||
| Pfam | 424 | 453 | 30 | 1.50E-04 | ||
| TIGRFAM | 424 | 455 | 32 | 1.40E-04 | ||
| ProSiteProfiles | 456 | 490 | 35 | 7.969 | ||
| Pfam | 459 | 486 | 28 | 0.024 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0353490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0353490.1, powered by CORGI.
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