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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0363530 |
| Transcript ID | Lj4g3v0363530.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Cicer arietinum] gi|502142159|ref|XP_004504820.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| PANTHER | 1 | 199 | 199 | 7.30E-137 | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 1 | 199 | 199 | 7.30E-137 | – | |
| TMHMM | 4 | 26 | 23 | – | – | |
| Phobius | 5 | 13 | 9 | – | – | |
| CDD | 5 | 185 | 181 | 1.84E-31 | – | |
| Pfam | 6 | 166 | 161 | 1.40E-16 | ||
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 64 | 46 | – | – | |
| TMHMM | 33 | 55 | 23 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 65 | 86 | 22 | – | – | |
| Phobius | 87 | 106 | 20 | – | – | |
| Phobius | 107 | 126 | 20 | – | – | |
| TMHMM | 108 | 127 | 20 | – | – | |
| Phobius | 127 | 131 | 5 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 132 | 151 | 20 | – | – | |
| Phobius | 152 | 171 | 20 | – | – | |
| Phobius | 172 | 192 | 21 | – | – | |
| TMHMM | 174 | 196 | 23 | – | – | |
| Phobius | 193 | 203 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of Lj4g3v0363530.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0363530.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.