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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0398290 |
| Transcript ID | Lj4g3v0398290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable pectinesterase/pectinesterase inhibitor 21-like [Cicer arietinum] gi|502117077|ref|XP_004495691.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| SignalP | 1 | 42 | 42 | – | – | |
| PANTHER | 10 | 532 | 523 | 0 | – | |
| PANTHER | 10 | 532 | 523 | 0 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| Phobius | 34 | 543 | 510 | – | – | |
| TIGRFAM | 56 | 186 | 131 | 2.80E-22 | ||
| SMART | 58 | 199 | 142 | 4.30E-27 | ||
| Gene3D | 60 | 188 | 129 | 3.80E-28 | ||
| SUPERFAMILY | 62 | 187 | 126 | 6.41E-25 | ||
| Pfam | 62 | 192 | 131 | 2.70E-21 | ||
| CDD | 65 | 192 | 128 | 1.16E-32 | – | |
| Gene3D | 214 | 528 | 315 | 6.80E-111 | ||
| SUPERFAMILY | 215 | 527 | 313 | 5.10E-103 | ||
| Pfam | 217 | 516 | 300 | 3.20E-130 | ||
| ProSitePatterns | 361 | 370 | 10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of Lj4g3v0398290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0398290.1, powered by CORGI.
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