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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0586760 |
| Transcript ID | Lj4g3v0586760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LAG1 longevity assurance homolog 2-like isoform X2 [Cicer arietinum] gi|502143094|ref|XP_004505216.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PIRSF | 3 | 287 | 285 | 5.90E-71 | ||
| PANTHER | 3 | 287 | 285 | 7.90E-179 | ||
| PANTHER | 3 | 287 | 285 | 7.90E-179 | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| TMHMM | 15 | 33 | 19 | – | – | |
| Phobius | 34 | 112 | 79 | – | – | |
| SMART | 64 | 271 | 208 | 9.70E-61 | ||
| ProSiteProfiles | 66 | 271 | 206 | 19.72 | ||
| Pfam | 66 | 263 | 198 | 2.20E-37 | ||
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 113 | 133 | 21 | – | – | |
| Phobius | 134 | 147 | 14 | – | – | |
| TMHMM | 148 | 170 | 23 | – | – | |
| Phobius | 148 | 172 | 25 | – | – | |
| Phobius | 173 | 192 | 20 | – | – | |
| Phobius | 193 | 219 | 27 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 220 | 238 | 19 | – | – | |
| Phobius | 239 | 263 | 25 | – | – | |
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 264 | 287 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj4g3v0586760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0586760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.