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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016439
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.703s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0091289.1
n.a. PREDICTED: ASC1-like protein-like [Glycine max] gi|356558997|ref|XP_003547788.1| chr0 37779600 37785327 +
2 domain predictions
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Lj0g3v0091289.3
n.a. PREDICTED: ASC1-like protein-like [Glycine max] gi|356558997|ref|XP_003547788.1| chr0 37781260 37785327 +
2 domain predictions
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Lj0g3v0223069.1
n.a. PREDICTED: LAG1 longevity assurance homolog 2-like isoform X2 [Cicer arietinum] gi|502143094|ref|XP_004505216.1| chr0 114853648 114858676 -
3 domain predictions
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Lj2g3v1197780.1
n.a. PREDICTED: ASC1-like protein-like [Glycine max] gi|356558997|ref|XP_003547788.1| chr2 19097056 19100717 -
2 domain predictions
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Lj2g3v1197780.2
n.a. PREDICTED: ASC1-like protein-like [Glycine max] gi|356558997|ref|XP_003547788.1| chr2 19097056 19103522 -
2 domain predictions
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Lj4g3v0586760.1
n.a. PREDICTED: LAG1 longevity assurance homolog 2-like isoform X2 [Cicer arietinum] gi|502143094|ref|XP_004505216.1| chr4 9270104 9275282 +
3 domain predictions
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LotjaGi2g1v0287100.1
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I1MMA9|I1MMA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0287100 LjG1.1_chr2 76020350 76026505 -
2 domain predictions
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LotjaGi4g1v0074100.1
n.a. LAG1 longevity assurance-like protein; TAIR: AT3G19260.1 LAG1 homologue 2; Swiss-Prot: sp|Q9LJK3|LAG12_ARATH LAG1 longevity assurance homolog 2; TrEMBL-Plants: tr|A0A1J7HBE9|A0A1J7HBE9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0074100 LjG1.1_chr4 9432795 9438418 -
3 domain predictions
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LotjaGi4g1v0153300.1
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25490485 25497512 -
2 domain predictions
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LotjaGi4g1v0153300.2
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25491360 25497486 -
2 domain predictions
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LotjaGi4g1v0153300.3
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25492829 25497177 -
2 domain predictions
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LotjaGi4g1v0153300.4
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25492829 25497177 -
2 domain predictions
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LotjaGi4g1v0153300.5
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25492829 25497177 -
2 domain predictions
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LotjaGi4g1v0153300.6
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25492829 25497177 -
2 domain predictions
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LotjaGi4g1v0153300.7
n.a. LAG1 longevity assurance-like protein; TAIR: AT1G13580.1 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 LjG1.1_chr4 25493745 25495933 -
2 domain predictions
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