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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0654120 |
| Transcript ID | Lj4g3v0654120.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163082|ref|XP_004512719.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 10 | 546 | 537 | 1.00E-268 | – | |
| PANTHER | 10 | 546 | 537 | 1.00E-268 | – | |
| SUPERFAMILY | 38 | 124 | 87 | 4.71E-07 | – | |
| ProSiteProfiles | 57 | 91 | 35 | 6.752 | ||
| ProSiteProfiles | 92 | 126 | 35 | 10.939 | ||
| Pfam | 92 | 139 | 48 | 4.60E-13 | ||
| Gene3D | 92 | 179 | 88 | 1.00E-07 | ||
| TIGRFAM | 96 | 128 | 33 | 1.10E-05 | ||
| ProSiteProfiles | 127 | 161 | 35 | 10.194 | ||
| TIGRFAM | 129 | 162 | 34 | 2.40E-04 | ||
| Pfam | 157 | 188 | 32 | 1.30E-05 | ||
| ProSiteProfiles | 162 | 196 | 35 | 10.03 | ||
| TIGRFAM | 164 | 189 | 26 | 0.0018 | ||
| Pfam | 196 | 244 | 49 | 1.60E-18 | ||
| ProSiteProfiles | 197 | 231 | 35 | 11.74 | ||
| TIGRFAM | 199 | 233 | 35 | 5.60E-09 | ||
| SUPERFAMILY | 231 | 335 | 105 | 4.71E-07 | – | |
| ProSiteProfiles | 232 | 266 | 35 | 12.934 | ||
| TIGRFAM | 234 | 268 | 35 | 1.10E-07 | ||
| Pfam | 263 | 294 | 32 | 5.70E-09 | ||
| ProSiteProfiles | 267 | 301 | 35 | 12.671 | ||
| TIGRFAM | 269 | 302 | 34 | 1.00E-08 | ||
| Pfam | 301 | 350 | 50 | 1.40E-16 | ||
| ProSiteProfiles | 302 | 336 | 35 | 12.244 | ||
| TIGRFAM | 304 | 338 | 35 | 3.50E-08 | ||
| Gene3D | 305 | 468 | 164 | 1.00E-07 | ||
| ProSiteProfiles | 337 | 371 | 35 | 11.893 | ||
| TIGRFAM | 339 | 372 | 34 | 6.60E-08 | ||
| Pfam | 371 | 420 | 50 | 1.20E-16 | ||
| ProSiteProfiles | 372 | 406 | 35 | 12.77 | ||
| TIGRFAM | 374 | 403 | 30 | 4.50E-09 | ||
| ProSiteProfiles | 407 | 441 | 35 | 12.704 | ||
| TIGRFAM | 409 | 443 | 35 | 8.90E-09 | ||
| Pfam | 441 | 490 | 50 | 1.30E-17 | ||
| ProSiteProfiles | 442 | 476 | 35 | 12.189 | ||
| TIGRFAM | 444 | 475 | 32 | 8.00E-06 | ||
| ProSiteProfiles | 477 | 511 | 35 | 14.425 | ||
| TIGRFAM | 480 | 513 | 34 | 6.80E-13 | ||
| Pfam | 507 | 539 | 33 | 7.20E-07 | ||
| ProSiteProfiles | 512 | 546 | 35 | 9.339 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0654120.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0654120.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.