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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0683990 |
| Transcript ID | Lj4g3v0683990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like [Cicer arietinum] gi|502167778|ref|XP_004514248.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 330 | 324 | 0 | – | |
| PANTHER | 7 | 330 | 324 | 0 | – | |
| ProSiteProfiles | 125 | 155 | 31 | 6.39 | ||
| Gene3D | 136 | 294 | 159 | 1.20E-08 | ||
| ProSiteProfiles | 159 | 193 | 35 | 9.186 | ||
| Pfam | 163 | 191 | 29 | 0.46 | ||
| Pfam | 192 | 219 | 28 | 5.30E-04 | ||
| ProSiteProfiles | 225 | 259 | 35 | 7.114 | ||
| ProSiteProfiles | 260 | 294 | 35 | 9.306 | ||
| TIGRFAM | 265 | 290 | 26 | 1.40E-04 | ||
| Pfam | 265 | 289 | 25 | 3.00E-04 | ||
| ProSiteProfiles | 295 | 329 | 35 | 9.657 | ||
| Pfam | 297 | 319 | 23 | 3.20E-04 | ||
| ProSiteProfiles | 365 | 395 | 31 | 6.412 | ||
| PANTHER | 366 | 677 | 312 | 0 | – | |
| Gene3D | 366 | 423 | 58 | 1.20E-08 | ||
| PANTHER | 366 | 677 | 312 | 0 | – | |
| Pfam | 395 | 444 | 50 | 1.40E-07 | ||
| ProSiteProfiles | 396 | 430 | 35 | 12.529 | ||
| TIGRFAM | 398 | 430 | 33 | 3.20E-07 | ||
| ProSiteProfiles | 432 | 466 | 35 | 5.338 | ||
| ProSiteProfiles | 468 | 498 | 31 | 6.829 | ||
| Pfam | 498 | 545 | 48 | 4.40E-09 | ||
| ProSiteProfiles | 499 | 533 | 35 | 10.764 | ||
| TIGRFAM | 501 | 535 | 35 | 2.50E-07 | ||
| ProSiteProfiles | 534 | 569 | 36 | 8.166 | ||
| TIGRFAM | 536 | 570 | 35 | 3.30E-04 | ||
| ProSiteProfiles | 570 | 600 | 31 | 7.739 | ||
| Pfam | 574 | 597 | 24 | 0.016 | ||
| TIGRFAM | 574 | 598 | 25 | 0.0021 | ||
| Gene3D | 630 | 653 | 24 | 1.20E-08 | ||
| ProSiteProfiles | 635 | 670 | 36 | 6.226 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0683990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0683990.1, powered by CORGI.
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