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Lj4g3v0755920.1

Overview

Field Value
Gene ID Lj4g3v0755920
Transcript ID Lj4g3v0755920.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: amino-acid acetyltransferase-like [Glycine max] gi|356565491|ref|XP_003550973.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30602
1 440 440 0 –
Hamap
MF_01105
1 424 424 113.6
IPR010167
PANTHER
PTHR30602:SF4
1 440 440 0 –
PIRSF
PIRSF000423
1 424 424 2.20E-152
IPR010167
Gene3D
G3DSA:3.40.1160.10
31 150 120 5.00E-39
IPR001048
SUPERFAMILY
SSF53633
31 147 117 8.61E-19
IPR001048
Pfam
PF00696
35 152 118 5.30E-07
IPR001048
SUPERFAMILY
SSF53633
226 274 49 5.50E-08
IPR001048
Gene3D
G3DSA:3.40.1160.10
226 272 47 5.00E-39
IPR001048
TIGRFAM
TIGR01890
233 424 192 3.00E-63
IPR010167
ProSiteProfiles
PS51186
278 426 149 18.261
IPR000182
SUPERFAMILY
SSF55729
281 428 148 5.49E-21
IPR016181
Gene3D
G3DSA:3.40.630.30
281 423 143 5.80E-34
IPR016181
Pfam
PF00583
313 383 71 4.60E-11
IPR000182
CDD
cd04301
319 381 63 3.28E-10 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004042
Molecular function Acetyl-CoA:L-glutamate N-acetyltransferase activity Catalysis of the reaction: L-glutamate + acetyl-CoA = N-acetyl-L-glutamate + CoA + H(+).
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006526
Biological process Arginine biosynthetic process The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
Subterm of
GO:0008080
Molecular function N-acetyltransferase activity Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
Subterm of

Genome browser

LORE1 insertions 39

Expression data

Expression pattern

Expression pattern of Lj4g3v0755920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0755920.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.