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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1151760 |
| Transcript ID | Lj4g3v1151760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR1 [Medicago truncatula] gi|357476727|ref|XP_003608649.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 2 | 587 | 586 | 0 | ||
| PANTHER | 2 | 587 | 586 | 0 | – | |
| SUPERFAMILY | 31 | 256 | 226 | 2.09E-27 | ||
| Phobius | 40 | 68 | 29 | – | – | |
| CDD | 45 | 245 | 201 | 5.43E-06 | ||
| TMHMM | 46 | 68 | 23 | – | – | |
| Gene3D | 51 | 252 | 202 | 2.10E-07 | – | |
| Phobius | 69 | 87 | 19 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 88 | 105 | 18 | – | – | |
| Phobius | 106 | 111 | 6 | – | – | |
| Pfam | 108 | 532 | 425 | 1.50E-91 | ||
| Phobius | 112 | 134 | 23 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 135 | 153 | 19 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 154 | 171 | 18 | – | – | |
| Phobius | 172 | 191 | 20 | – | – | |
| Phobius | 192 | 211 | 20 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 245 | 23 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 246 | 350 | 105 | – | – | |
| SUPERFAMILY | 335 | 583 | 249 | 2.09E-27 | ||
| Phobius | 351 | 373 | 23 | – | – | |
| TMHMM | 351 | 373 | 23 | – | – | |
| Phobius | 374 | 392 | 19 | – | – | |
| Phobius | 393 | 412 | 20 | – | – | |
| TMHMM | 393 | 412 | 20 | – | – | |
| Phobius | 413 | 432 | 20 | – | – | |
| Phobius | 433 | 455 | 23 | – | – | |
| TMHMM | 433 | 455 | 23 | – | – | |
| Phobius | 456 | 466 | 11 | – | – | |
| Phobius | 467 | 486 | 20 | – | – | |
| TMHMM | 470 | 492 | 23 | – | – | |
| Phobius | 487 | 506 | 20 | – | – | |
| TMHMM | 505 | 527 | 23 | – | – | |
| Phobius | 507 | 531 | 25 | – | – | |
| Phobius | 532 | 550 | 19 | – | – | |
| TMHMM | 551 | 573 | 23 | – | – | |
| Phobius | 551 | 569 | 19 | – | – | |
| Phobius | 570 | 594 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1151760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1151760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.