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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1152940 |
| Transcript ID | Lj4g3v1152940.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR1 [Medicago truncatula] gi|357482335|ref|XP_003611453.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 40 | 40 | – | – | |
| PANTHER | 4 | 590 | 587 | 0 | ||
| PANTHER | 4 | 590 | 587 | 0 | – | |
| CDD | 41 | 242 | 202 | 3.60E-04 | ||
| Phobius | 41 | 66 | 26 | – | – | |
| SUPERFAMILY | 44 | 254 | 211 | 3.14E-20 | ||
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 67 | 85 | 19 | – | – | |
| TMHMM | 81 | 103 | 23 | – | – | |
| Phobius | 86 | 103 | 18 | – | – | |
| Phobius | 104 | 109 | 6 | – | – | |
| Pfam | 106 | 534 | 429 | 2.60E-90 | ||
| Phobius | 110 | 132 | 23 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 133 | 151 | 19 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 152 | 169 | 18 | – | – | |
| Phobius | 170 | 189 | 20 | – | – | |
| Phobius | 190 | 209 | 20 | – | – | |
| TMHMM | 195 | 217 | 23 | – | – | |
| Phobius | 210 | 220 | 11 | – | – | |
| Phobius | 221 | 243 | 23 | – | – | |
| TMHMM | 222 | 244 | 23 | – | – | |
| Phobius | 244 | 346 | 103 | – | – | |
| SUPERFAMILY | 331 | 583 | 253 | 3.14E-20 | ||
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 347 | 368 | 22 | – | – | |
| Phobius | 369 | 379 | 11 | – | – | |
| Phobius | 380 | 405 | 26 | – | – | |
| TMHMM | 384 | 403 | 20 | – | – | |
| Phobius | 406 | 425 | 20 | – | – | |
| TMHMM | 424 | 446 | 23 | – | – | |
| Phobius | 426 | 446 | 21 | – | – | |
| Phobius | 447 | 468 | 22 | – | – | |
| Phobius | 469 | 488 | 20 | – | – | |
| Phobius | 489 | 508 | 20 | – | – | |
| Phobius | 509 | 533 | 25 | – | – | |
| Phobius | 534 | 552 | 19 | – | – | |
| Phobius | 553 | 575 | 23 | – | – | |
| TMHMM | 553 | 575 | 23 | – | – | |
| Phobius | 576 | 596 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1152940.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1152940.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.