Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v1235950.1

Overview

Field Value
Gene ID Lj4g3v1235950
Transcript ID Lj4g3v1235950.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 7-like [Cicer arietinum] gi|502077175|ref|XP_004485577.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 724 724 0
PANTHER 1 724 724 0
Phobius 1 19 19
Pfam 9 552 544 1.10E-155
TIGRFAM 9 723 715 2.40E-210
TMHMM 15 37 23
Phobius 20 39 20
Phobius 40 103 64
TMHMM 104 126 23
Phobius 104 122 19
Phobius 123 141 19
Phobius 142 161 20
Phobius 162 172 11
TMHMM 171 193 23
Phobius 173 193 21
Phobius 194 218 25
TMHMM 219 238 20
Phobius 219 238 20
Phobius 239 249 11
TMHMM 248 270 23
Phobius 250 270 21
Phobius 271 289 19
TMHMM 282 304 23
Phobius 290 309 20
Phobius 310 345 36
TMHMM 338 360 23
Phobius 346 365 20
Phobius 366 370 5
Phobius 371 394 24
TMHMM 373 395 23
Phobius 395 400 6
TMHMM 399 421 23
Phobius 401 422 22
Phobius 423 427 5
Phobius 428 448 21
TMHMM 428 445 18
Phobius 449 468 20
Phobius 469 486 18
Phobius 487 491 5
TMHMM 491 513 23
Phobius 492 518 27
Phobius 519 724 206

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj4g3v1235950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1235950.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.