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Lj4g3v1345800.1

Overview

Field Value
Gene ID Lj4g3v1345800
Transcript ID Lj4g3v1345800.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: PTI1-like tyrosine-protein kinase 3-like isoform X1 [Cicer arietinum] gi|502121621|ref|XP_004497390.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 25 25 – –
PANTHER
PTHR27001:SF115
43 57 15 6.10E-172 –
PANTHER
PTHR27001
43 57 15 6.10E-172 –
MobiDBLite
mobidb-lite
58 95 38 – –
PANTHER
PTHR27001
80 302 223 6.10E-172 –
PANTHER
PTHR27001:SF115
80 302 223 6.10E-172 –
Gene3D
G3DSA:3.30.200.20
85 175 91 2.70E-22 –
SUPERFAMILY
SSF56112
93 300 208 3.01E-53
IPR011009
ProSiteProfiles
PS50011
113 302 190 29.488
IPR000719
SMART
SM00219
113 299 187 2.10E-10
IPR020635
Pfam
PF07714
118 301 184 7.10E-31
IPR001245
ProSitePatterns
PS00107
119 142 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
176 301 126 1.40E-26 –
ProSitePatterns
PS00109
241 253 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj4g3v1345800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1345800.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.